Duncan Odom publications

Global impact of RNA polymerase II elongation inhibition on alternative splicing regulation.
Ip JY;Schmidt D;Pan Q;Ramani AK;Fraser AG;Odom DT;Blencowe BJ
Genome Res 2011; 21 (3 ):390-401.
PubMed;  DOI: 10.1101/gr.111070.110.

Five-Vertebrate ChIP-seq Reveals the Evolutionary Dynamics of Transcription Factor Binding
Schmidt D;Wilson MD;Ballester B;Schwalie PC;Brown GD;Marshall A;Kutter C;Watt S;Martinez-Jimenez CP;Mackay S;Talianidis I;Flicek P;Odom DT
Science 2010; 328 (5981):1036-1040.
PubMed;  DOI: 10.1126/science.1186176.

A CTCF-independent role for cohesin in tissue-specific transcription
Schmidt D;Schwalie PC;Ross-Innes CS;Hurtado A;Brown GD;Carroll JS;Flicek P;Odom DT
Genome Res 2010; 20 (5):578-588.
UKPubMed (open access);  PubMed;  DOI: 10.1101/gr.100479.109.

Systematic comparison of microarray profiling, real-time PCR, and next-generation sequencing technologies for measuring differential microRNA expression
Git A;Dvinge H;Salmon-Divon M;Osborne M;Kutter C;Hadfield J;Bertone P;Caldas C
RNA 2010; 16 (5):991-1006.
DOI: 10.1261/rna.1947110.

Cooperative interaction between retinoic acid receptor-alpha and estrogen receptor in breast cancer
Ross-Innes CS;Stark R;Holmes KA;Schmidt D;Spyrou C;Russell R;Massie CE;Vowler SL;Eldridge M;Carroll JS
Genes Dev 2010; 24 (2):171-182.
UKPubMed (open access);  PubMed;  DOI: 10.1101/gad.552910.

Transcriptional role of cyclin D1 in development revealed by a genetic-proteomic screen
Bienvenu F;Jirawatnotai S;Elias JE;Meyer CA;Mizeracka K;Marson A;Frampton GM;Cole MF;Odom DT;Odajima J;Geng Y;Zagozdzon A;Jecrois M;Young RA;Liu XS;Cepko CL;Gygi SP;Sicinski P
Nature 2010; 463 (7279):374-378.
PubMed;  DOI: 10.1038/nature08684.

Evolution of transcriptional control in mammals
Wilson MD;Odom DT
Curr Opin Genet Dev 2009; 19 (6):579-585.
PubMed;  DOI: 10.1016/j.gde.2009.10.003.

miRNA, siRNA, piRNA Knowns of the unknown
Kutter C;Svoboda P
RNA Biol 2008; 5 (4):181-188.
PubMed; 

Genome-scale validation of deep-sequencing libraries
Schmidt D;Stark R;Wilson MD;Brown GD;Odom DT
PLoS ONE 2008; 3 (11):e3713.
UKPubMed (open access);  PubMed;  DOI: 10.1371/journal.pone.0003713.

Species-specific transcription in mice carrying human chromosome 21
Wilson MD;Barbosa-Morais NL;Schmidt D;Conboy CM;Vanes L;Tybulewicz VLJ;Fisher EMC;Tavare S;Odom DT
Science 2008; 322 (5900):434-438.

Cell cycle genes are the evolutionarily conserved targets of the E2F4 transcription factor.
Conboy CM;Spyrou C;Thorne NP;Wade EJ;Barbosa-Morais NL;Wilson MD;Bhattacharjee A;Young RA;Tavare S;Lees JA;Odom DT
PLoS ONE 2007; 2 (10):e1061.

Tissue-specific transcriptional regulation has diverged significantly between human and mouse
Odom DT;Dowell RD;Jacobsen ES;Gordon W;Danford TW;MacIsaac KD;Rolfe PA;Conboy CM;Gifford DK;Fraenkel E
Nat Genet 2007; 39 (6):730-732.